Carnation DB

Dca13256.1

Annotation

8-exons
f-1
sp|A9P851_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825619#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Os02t0146600-01 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A).
Repeat List (scaffold1614)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13256.1	403	814	814	45.57	412	90	0
Target_name	Start	End	Length	Cov(%)
sp\|A9P851_POPTR	1	413	413	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13256.1	403	814	814	45.2	412	89	0
Target_name	Start	End	Length	Cov(%)
Os02t0146600-01	1	414	415	99.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1614	Augustus	mRNA	35328	39462	.	+	.	ID=Dca13256.1;Parent=Dca13256
scaffold1614	Augustus	exon	35328	35522	.	+	.	ID=Dca13256.1.exon1;Parent=Dca13256.1
scaffold1614	Augustus	exon	35667	36182	.	+	.	ID=Dca13256.1.exon2;Parent=Dca13256.1
scaffold1614	Augustus	exon	36585	36941	.	+	.	ID=Dca13256.1.exon3;Parent=Dca13256.1
scaffold1614	Augustus	exon	37017	37152	.	+	.	ID=Dca13256.1.exon4;Parent=Dca13256.1
scaffold1614	Augustus	exon	37382	37448	.	+	.	ID=Dca13256.1.exon5;Parent=Dca13256.1
scaffold1614	Augustus	exon	37594	37700	.	+	.	ID=Dca13256.1.exon6;Parent=Dca13256.1
scaffold1614	Augustus	exon	37813	38243	.	+	.	ID=Dca13256.1.exon7;Parent=Dca13256.1
scaffold1614	Augustus	exon	38827	39462	.	+	.	ID=Dca13256.1.exon8;Parent=Dca13256.1