Carnation DB

Dca13327.1

Annotation

7-exons
f-1
sp|G5DXB8_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
AT3G15150.1 | Symbols: HPY2, MMS21, ATMMS21 | RING/U-box superfamily protein | chr3:5102210-5104082 REVERSE LENGTH=249
Repeat List (scaffold162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13327.1	3	185	256	55.46	183	78	1e-82
Target_name	Start	End	Length	Cov(%)
sp\|G5DXB8_SILLA	2	184	184	99.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13327.1	1	253	256	52.34	253	53	1e-72
Target_name	Start	End	Length	Cov(%)
AT3G15150.1	1	249	249	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold162	Augustus	mRNA	3304	5626	.	+	.	ID=Dca13327.1;Parent=Dca13327
scaffold162	Augustus	exon	3304	3402	.	+	.	ID=Dca13327.1.exon1;Parent=Dca13327.1
scaffold162	Augustus	exon	3540	3611	.	+	.	ID=Dca13327.1.exon2;Parent=Dca13327.1
scaffold162	Augustus	exon	4478	4588	.	+	.	ID=Dca13327.1.exon3;Parent=Dca13327.1
scaffold162	Augustus	exon	4697	4807	.	+	.	ID=Dca13327.1.exon4;Parent=Dca13327.1
scaffold162	Augustus	exon	5007	5146	.	+	.	ID=Dca13327.1.exon5;Parent=Dca13327.1
scaffold162	Augustus	exon	5289	5374	.	+	.	ID=Dca13327.1.exon6;Parent=Dca13327.1
scaffold162	Augustus	exon	5475	5626	.	+	.	ID=Dca13327.1.exon7;Parent=Dca13327.1