Carnation DB

Dca13329.1

Annotation

7-exons
f-1
sp|D7TM15_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g05360#GO:0003723#1F0P0C
sp|B9T303_RICCO#Far upstream element-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0350300#GO:0003723;GO:0004221#2F0P0C
Repeat List (scaffold162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13329.1	1	285	285	70.52	285	71	5e-111
Target_name	Start	End	Length	Cov(%)
sp\|D7TM15_VITVI	78	357	357	78.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13329.1	1	147	285	19.64	147	30	2e-12
Target_name	Start	End	Length	Cov(%)
AT5G04430.2	117	309	334	57.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold162	Augustus	mRNA	16081	19217	.	+	.	ID=Dca13329.1;Parent=Dca13329
scaffold162	Augustus	exon	16081	16314	.	+	.	ID=Dca13329.1.exon1;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	16411	16523	.	+	.	ID=Dca13329.1.exon2;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	17468	17661	.	+	.	ID=Dca13329.1.exon3;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	18161	18231	.	+	.	ID=Dca13329.1.exon4;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	18672	18767	.	+	.	ID=Dca13329.1.exon5;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	18970	19031	.	+	.	ID=Dca13329.1.exon6;Parent=Dca13329.1
scaffold162	Augus-PASA	exon	19130	19217	.	+	.	ID=Dca13329.1.exon7;Parent=Dca13329.1
scaffold162	Augustus	mRNA	16081	19217	.	+	.	ID=Dca13329.2;Parent=Dca13329
scaffold162	Augustus	exon	16081	16314	.	+	.	ID=Dca13329.2.exon1;Parent=Dca13329.2
scaffold162	Augus-PASA	exon	16411	16523	.	+	.	ID=Dca13329.2.exon2;Parent=Dca13329.2
scaffold162	Augus-PASA	exon	17468	17661	.	+	.	ID=Dca13329.2.exon3;Parent=Dca13329.2
scaffold162	Augustus	exon	18107	18231	.	+	.	ID=Dca13329.2.exon4;Parent=Dca13329.2
scaffold162	Augus-PASA	exon	18672	18767	.	+	.	ID=Dca13329.2.exon5;Parent=Dca13329.2
scaffold162	Augus-PASA	exon	18970	19031	.	+	.	ID=Dca13329.2.exon6;Parent=Dca13329.2
scaffold162	Augus-PASA	exon	19130	19217	.	+	.	ID=Dca13329.2.exon7;Parent=Dca13329.2