Carnation DB

Dca13356.1

Annotation

5-exons
f-1
sp|F2YS22_CARPA#Chloroplast methionine sulfoxide reductase B1#Carica papaya (Papaya)#unknown#GO:0008113#1F0P0C
Repeat List (scaffold162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13356.1	1	149	151	83.44	149	85	6e-75
Target_name	Start	End	Length	Cov(%)
sp\|F2YS22_CARPA	51	199	199	74.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13356.1	9	145	151	74.17	137	82	2e-68
Target_name	Start	End	Length	Cov(%)
AT1G53670.1	58	194	202	67.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold162	Augus-PASA	mRNA	240758	242575	.	+	.	ID=Dca13356.1;Parent=Dca13356
scaffold162	Augus-PASA	exon	240758	240800	.	+	.	ID=Dca13356.1.exon1;Parent=Dca13356.1
scaffold162	Augus-PASA	exon	241689	241800	.	+	.	ID=Dca13356.1.exon2;Parent=Dca13356.1
scaffold162	Augus-PASA	exon	241956	242021	.	+	.	ID=Dca13356.1.exon3;Parent=Dca13356.1
scaffold162	Augus-PASA	exon	242115	242312	.	+	.	ID=Dca13356.1.exon4;Parent=Dca13356.1
scaffold162	Augus-PASA	exon	242539	242575	.	+	.	ID=Dca13356.1.exon5;Parent=Dca13356.1