Carnation DB

Dca13357.1

Annotation

9-exons
f-1
sp|F6H2J6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g00140#GO:0005634;GO:0003700;GO:0004871#2F0P1C
AT1G78540.2 | Symbols: SHB | SH2 domain protein B | chr1:29541195-29544574 REVERSE LENGTH=696
Repeat List (scaffold162)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13357.1	8	555	558	51.07	548	52	1e-159
Target_name	Start	End	Length	Cov(%)
sp\|F6H2J6_VITVI	92	641	669	82.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13357.1	4	554	558	41.93	551	43	1e-127
Target_name	Start	End	Length	Cov(%)
AT1G78540.2	161	663	696	72.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold162	Augustus	mRNA	245625	248423	.	+	.	ID=Dca13357.1;Parent=Dca13357
scaffold162	Augustus	exon	245625	245714	.	+	.	ID=Dca13357.1.exon1;Parent=Dca13357.1
scaffold162	Augustus	exon	245793	245882	.	+	.	ID=Dca13357.1.exon2;Parent=Dca13357.1
scaffold162	Augustus	exon	246248	246325	.	+	.	ID=Dca13357.1.exon3;Parent=Dca13357.1
scaffold162	Augustus	exon	246566	246730	.	+	.	ID=Dca13357.1.exon4;Parent=Dca13357.1
scaffold162	Augustus	exon	246807	247459	.	+	.	ID=Dca13357.1.exon5;Parent=Dca13357.1
scaffold162	Augustus	exon	247562	247724	.	+	.	ID=Dca13357.1.exon6;Parent=Dca13357.1
scaffold162	Augus-PASA	exon	247806	248149	.	+	.	ID=Dca13357.1.exon7;Parent=Dca13357.1
scaffold162	Augus-PASA	exon	248240	248317	.	+	.	ID=Dca13357.1.exon8;Parent=Dca13357.1
scaffold162	Augus-PASA	exon	248408	248423	.	+	.	ID=Dca13357.1.exon9;Parent=Dca13357.1