Dca13426.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1624)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13426.1 |
29 |
607 |
607 |
39.04 |
579 |
38 |
2e-114
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
624 |
1501 |
40.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13426.1 |
346 |
607 |
607 |
13.5 |
262 |
31 |
4e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
654 |
1539 |
15.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1624 |
Augustus |
mRNA |
69562 |
71474 |
. |
+ |
. |
ID=Dca13426.1;Parent=Dca13426 |
| scaffold1624 |
Augustus |
exon |
69562 |
70956 |
. |
+ |
. |
ID=Dca13426.1.exon1;Parent=Dca13426.1 |
| scaffold1624 |
Augustus |
exon |
71046 |
71474 |
. |
+ |
. |
ID=Dca13426.1.exon2;Parent=Dca13426.1 |
