Dca13430.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold16240)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13430.1 |
1 |
314 |
693 |
13.7 |
314 |
30 |
3e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
81 |
381 |
1313 |
22.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13430.1 |
304 |
436 |
693 |
7.93 |
133 |
39 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
659 |
797 |
1428 |
9.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16240 |
Augustus |
mRNA |
239 |
3799 |
. |
- |
. |
ID=Dca13430.1;Parent=Dca13430 |
| scaffold16240 |
Augustus |
exon |
239 |
1148 |
. |
- |
. |
ID=Dca13430.1.exon1;Parent=Dca13430.1 |
| scaffold16240 |
Augustus |
exon |
1364 |
1625 |
. |
- |
. |
ID=Dca13430.1.exon2;Parent=Dca13430.1 |
| scaffold16240 |
Augustus |
exon |
2890 |
3799 |
. |
- |
. |
ID=Dca13430.1.exon3;Parent=Dca13430.1 |
