Dca13446.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold16254)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13446.1 |
1 |
548 |
648 |
40.27 |
548 |
40 |
2e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
84 |
711 |
1717 |
36.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13446.1 |
341 |
433 |
648 |
5.09 |
93 |
36 |
5e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
100 |
191 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16254 |
Augustus |
mRNA |
408 |
2621 |
. |
+ |
. |
ID=Dca13446.1;Parent=Dca13446 |
| scaffold16254 |
Augustus |
exon |
408 |
665 |
. |
+ |
. |
ID=Dca13446.1.exon1;Parent=Dca13446.1 |
| scaffold16254 |
Augustus |
exon |
771 |
1304 |
. |
+ |
. |
ID=Dca13446.1.exon2;Parent=Dca13446.1 |
| scaffold16254 |
Augustus |
exon |
1385 |
2267 |
. |
+ |
. |
ID=Dca13446.1.exon3;Parent=Dca13446.1 |
| scaffold16254 |
Augustus |
exon |
2350 |
2621 |
. |
+ |
. |
ID=Dca13446.1.exon4;Parent=Dca13446.1 |
