Carnation DB

Dca13452.1

Annotation

5-exons
f-1
sp|Q6UEI8_MESCR#Circadian clock associated1#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=CCA1#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold1626)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13452.1	1	213	218	65.13	213	58	3e-60
Target_name	Start	End	Length	Cov(%)
sp\|Q6UEI8_MESCR	1	242	739	32.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13452.1	1	146	218	45.87	146	67	7e-45
Target_name	Start	End	Length	Cov(%)
AT1G01060.1	1	149	645	23.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1626	Augustus	mRNA	36628	39657	.	+	.	ID=Dca13452.1;Parent=Dca13452
scaffold1626	Augustus	exon	36628	36666	.	+	.	ID=Dca13452.1.exon1;Parent=Dca13452.1
scaffold1626	Augus-PASA	exon	37080	37191	.	+	.	ID=Dca13452.1.exon2;Parent=Dca13452.1
scaffold1626	Augus-PASA	exon	37905	37966	.	+	.	ID=Dca13452.1.exon3;Parent=Dca13452.1
scaffold1626	Augus-PASA	exon	39049	39273	.	+	.	ID=Dca13452.1.exon4;Parent=Dca13452.1
scaffold1626	Augus-PASA	exon	39439	39657	.	+	.	ID=Dca13452.1.exon5;Parent=Dca13452.1