Carnation DB

Dca13519.1

Annotation

7-exons
f-1
sp|F6HK38_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g01130#GO:0005853;GO:0003746#1F0P1C
Os02t0220500-01 Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma).
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13519.1	1	417	417	82.25	417	82	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HK38_VITVI	1	423	433	97.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13519.1	1	417	417	79.37	417	79	0
Target_name	Start	End	Length	Cov(%)
Os02t0220500-01	1	414	415	99.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augus-PASA	mRNA	139046	142257	.	-	.	ID=Dca13519.1;Parent=Dca13519
scaffold163	Augus-PASA	exon	139046	139422	.	-	.	ID=Dca13519.1.exon1;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	140108	140609	.	-	.	ID=Dca13519.1.exon2;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	140716	140817	.	-	.	ID=Dca13519.1.exon3;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	140911	140963	.	-	.	ID=Dca13519.1.exon4;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	141049	141109	.	-	.	ID=Dca13519.1.exon5;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	141190	141339	.	-	.	ID=Dca13519.1.exon6;Parent=Dca13519.1
scaffold163	Augus-PASA	exon	142249	142257	.	-	.	ID=Dca13519.1.exon7;Parent=Dca13519.1