Carnation DB

Dca1352.1

Annotation

5-exons
f-1
sp|B7FGH5_MEDTR#Putative uncharacterized protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#unknown#GO:0003677;GO:0003899#2F0P0C
Os07t0172500-01 Similar to DNA-directed RNA polymerase II 13.6 kDa polypeptide (EC 2.7.7.6).
Repeat List (scaffold10393)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1352.1	1	116	116	85.34	116	86	2e-56
Target_name	Start	End	Length	Cov(%)
sp\|B7FGH5_MEDTR	1	116	116	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1352.1	1	112	116	81.89	112	85	2e-53
Target_name	Start	End	Length	Cov(%)
Os07t0172500-01	1	112	121	92.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10393	Augustus	mRNA	6224	7594	.	+	.	ID=Dca1352.1;Parent=Dca1352
scaffold10393	Augustus	exon	6224	6276	.	+	.	ID=Dca1352.1.exon1;Parent=Dca1352.1
scaffold10393	Augustus	exon	6386	6475	.	+	.	ID=Dca1352.1.exon2;Parent=Dca1352.1
scaffold10393	Augustus	exon	6562	6640	.	+	.	ID=Dca1352.1.exon3;Parent=Dca1352.1
scaffold10393	Augustus	exon	7273	7368	.	+	.	ID=Dca1352.1.exon4;Parent=Dca1352.1
scaffold10393	Augustus	exon	7562	7594	.	+	.	ID=Dca1352.1.exon5;Parent=Dca1352.1