Carnation DB

Dca13531.1

Annotation

6-exons
f-1
sp|F6HQC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g00620#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
sp|B9RYJ7_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0813720#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13531.1	1	211	221	51.58	211	50	2e-51
Target_name	Start	End	Length	Cov(%)
sp\|F6HQC1_VITVI	1	219	252	86.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13531.1	5	214	221	46.15	210	47	2e-44
Target_name	Start	End	Length	Cov(%)
AT3G19184.1	7	222	277	77.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	213777	215081	.	-	.	ID=Dca13531.1;Parent=Dca13531
scaffold163	Augustus	exon	213777	213824	.	-	.	ID=Dca13531.1.exon1;Parent=Dca13531.1
scaffold163	Augustus	exon	213917	214123	.	-	.	ID=Dca13531.1.exon2;Parent=Dca13531.1
scaffold163	Augustus	exon	214363	214534	.	-	.	ID=Dca13531.1.exon3;Parent=Dca13531.1
scaffold163	Augustus	exon	214629	214663	.	-	.	ID=Dca13531.1.exon4;Parent=Dca13531.1
scaffold163	Augustus	exon	214799	214876	.	-	.	ID=Dca13531.1.exon5;Parent=Dca13531.1
scaffold163	Augustus	exon	214956	215081	.	-	.	ID=Dca13531.1.exon6;Parent=Dca13531.1