Carnation DB

Dca13538.1

Annotation

5-exons
f-1
sp|Q5ZAQ6_ORYSJ#HGWP repeat containing protein-like#Oryza sativa subsp japonica (Rice)#Name=B1143G03.19#unknown#0F0P0C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13538.1	1	309	382	29.58	309	33	2e-38
Target_name	Start	End	Length	Cov(%)
sp\|Q5ZAQ6_ORYSJ	1	332	525	63.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13538.1	79	224	382	19.1	146	49	5e-36
Target_name	Start	End	Length	Cov(%)
Os02t0129000-00	95	245	686	22.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	255466	258029	.	-	.	ID=Dca13538.1;Parent=Dca13538
scaffold163	Augustus	exon	255466	255546	.	-	.	ID=Dca13538.1.exon1;Parent=Dca13538.1
scaffold163	Augustus	exon	256175	256570	.	-	.	ID=Dca13538.1.exon2;Parent=Dca13538.1
scaffold163	Augustus	exon	257169	257372	.	-	.	ID=Dca13538.1.exon3;Parent=Dca13538.1
scaffold163	Augustus	exon	257473	257723	.	-	.	ID=Dca13538.1.exon4;Parent=Dca13538.1
scaffold163	Augustus	exon	257813	258029	.	-	.	ID=Dca13538.1.exon5;Parent=Dca13538.1