Carnation DB

Dca1354.1

Annotation

6-exons
f-3
sp|B9I3X7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834365#GO:0030170;GO:0016769#2F0P0C
sp|Q14TE3_TOBAC#Serine palmitpoyltransferase subunit2#Nicotiana tabacum (Common tobacco)#Name=NtLCB2#GO:0030170;GO:0016769;GO:0009058#2F1P0C
Repeat List (scaffold10396)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1354.1	1	256	279	84.58	256	93	2e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9I3X7_POPTR	217	472	489	52.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1354.1	1	256	279	82.07	256	90	5e-137
Target_name	Start	End	Length	Cov(%)
AT5G23670.1	217	472	489	52.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10396	Augustus	mRNA	208	2651	.	+	.	ID=Dca1354.1;Parent=Dca1354
scaffold10396	Augustus	exon	208	371	.	+	.	ID=Dca1354.1.exon1;Parent=Dca1354.1
scaffold10396	Augustus	exon	850	1011	.	+	.	ID=Dca1354.1.exon2;Parent=Dca1354.1
scaffold10396	Augustus	exon	1605	1731	.	+	.	ID=Dca1354.1.exon3;Parent=Dca1354.1
scaffold10396	Augustus	exon	1848	2014	.	+	.	ID=Dca1354.1.exon4;Parent=Dca1354.1
scaffold10396	Augustus	exon	2142	2249	.	+	.	ID=Dca1354.1.exon5;Parent=Dca1354.1
scaffold10396	Augustus	exon	2538	2651	.	+	.	ID=Dca1354.1.exon6;Parent=Dca1354.1