Carnation DB

Dca13547.1

Annotation

5-exons
f-1
sp|A9PEC8_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003677;GO:0006355#1F1P0C
sp|B9MVE5_POPTR#NAC domain protein, IPR003441#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=NAC139#GO:0003677;GO:0006355#1F1P0C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13547.1	23	456	456	34.64	434	36	1e-48
Target_name	Start	End	Length	Cov(%)
sp\|A9PEC8_POPTR	30	411	415	92.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13547.1	40	163	456	9.42	124	30	7e-10
Target_name	Start	End	Length	Cov(%)
AT3G10490.2	36	179	451	31.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	327391	332441	.	+	.	ID=Dca13547.1;Parent=Dca13547
scaffold163	Augustus	exon	327391	327619	.	+	.	ID=Dca13547.1.exon1;Parent=Dca13547.1
scaffold163	Augustus	exon	328450	328673	.	+	.	ID=Dca13547.1.exon2;Parent=Dca13547.1
scaffold163	Augustus	exon	328766	329098	.	+	.	ID=Dca13547.1.exon3;Parent=Dca13547.1
scaffold163	Augustus	exon	329401	329704	.	+	.	ID=Dca13547.1.exon4;Parent=Dca13547.1
scaffold163	Augustus	exon	332161	332441	.	+	.	ID=Dca13547.1.exon5;Parent=Dca13547.1