Carnation DB

Dca13550.1

Annotation

7-exons
f-1
sp|B9HRS7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821209#GO:0008270#1F0P0C
AT4G34370.1 | Symbols: ATARI1, ARI1 | RING/U-box superfamily protein | chr4:16434547-16437037 FORWARD LENGTH=597
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13550.1	2	617	617	61.1	616	61	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HRS7_POPTR	5	591	591	99.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13550.1	1	617	617	59.31	617	59	0
Target_name	Start	End	Length	Cov(%)
AT4G34370.1	1	597	597	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	351571	357279	.	+	.	ID=Dca13550.1;Parent=Dca13550
scaffold163	Augustus	exon	351571	351729	.	+	.	ID=Dca13550.1.exon1;Parent=Dca13550.1
scaffold163	Augustus	exon	352554	352586	.	+	.	ID=Dca13550.1.exon2;Parent=Dca13550.1
scaffold163	Augustus	exon	353139	353412	.	+	.	ID=Dca13550.1.exon3;Parent=Dca13550.1
scaffold163	Augustus	exon	354251	354731	.	+	.	ID=Dca13550.1.exon4;Parent=Dca13550.1
scaffold163	Augus-PASA	exon	355813	356358	.	+	.	ID=Dca13550.1.exon5;Parent=Dca13550.1
scaffold163	Augus-PASA	exon	356569	356711	.	+	.	ID=Dca13550.1.exon6;Parent=Dca13550.1
scaffold163	Augus-PASA	exon	357062	357279	.	+	.	ID=Dca13550.1.exon7;Parent=Dca13550.1