Carnation DB

Dca13553.1

Annotation

7-exons
f-1
sp|B9HZW7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_568927#unknown#0F0P0C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13553.1	209	400	448	19.64	192	38	2e-23
Target_name	Start	End	Length	Cov(%)
sp\|B9HZW7_POPTR	353	577	580	38.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13553.1	293	402	448	12.94	110	41	5e-16
Target_name	Start	End	Length	Cov(%)
AT3G15410.2	448	589	590	24.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	370326	377272	.	-	.	ID=Dca13553.1;Parent=Dca13553
scaffold163	Augustus	exon	370326	370533	.	-	.	ID=Dca13553.1.exon1;Parent=Dca13553.1
scaffold163	Augustus	exon	371012	371067	.	-	.	ID=Dca13553.1.exon2;Parent=Dca13553.1
scaffold163	Augustus	exon	372684	372779	.	-	.	ID=Dca13553.1.exon3;Parent=Dca13553.1
scaffold163	Augustus	exon	372923	373030	.	-	.	ID=Dca13553.1.exon4;Parent=Dca13553.1
scaffold163	Augustus	exon	373638	373716	.	-	.	ID=Dca13553.1.exon5;Parent=Dca13553.1
scaffold163	Augustus	exon	374526	374599	.	-	.	ID=Dca13553.1.exon6;Parent=Dca13553.1
scaffold163	Augustus	exon	376547	377272	.	-	.	ID=Dca13553.1.exon7;Parent=Dca13553.1