Carnation DB

Dca13679.1

Annotation

8-exons
f-1
sp|B9T384_RICCO#Protease m50 membrane-bound transcription factor site 2 protease, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0096190#GO:0016020;GO:0004222;GO:0006508#1F1P1C
Repeat List (scaffold1637)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13679.1	30	491	527	39.65	462	43	2e-91
Target_name	Start	End	Length	Cov(%)
sp\|B9T384_RICCO	61	508	537	83.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13679.1	31	524	527	35.29	494	37	3e-79
Target_name	Start	End	Length	Cov(%)
AT4G20310.2	57	480	488	86.88

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1637	Augustus	mRNA	43530	47079	.	+	.	ID=Dca13679.1;Parent=Dca13679
scaffold1637	Augustus	exon	43530	43615	.	+	.	ID=Dca13679.1.exon1;Parent=Dca13679.1
scaffold1637	Augustus	exon	44778	44844	.	+	.	ID=Dca13679.1.exon2;Parent=Dca13679.1
scaffold1637	Augustus	exon	44955	45149	.	+	.	ID=Dca13679.1.exon3;Parent=Dca13679.1
scaffold1637	Augustus	exon	45281	45384	.	+	.	ID=Dca13679.1.exon4;Parent=Dca13679.1
scaffold1637	Augustus	exon	45495	45687	.	+	.	ID=Dca13679.1.exon5;Parent=Dca13679.1
scaffold1637	Augustus	exon	45842	45922	.	+	.	ID=Dca13679.1.exon6;Parent=Dca13679.1
scaffold1637	Augustus	exon	46139	46549	.	+	.	ID=Dca13679.1.exon7;Parent=Dca13679.1
scaffold1637	Augustus	exon	46633	47079	.	+	.	ID=Dca13679.1.exon8;Parent=Dca13679.1