Carnation DB

Dca13775.1

Annotation

7-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
Repeat List (scaffold1642)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13775.1	281	580	629	26.39	300	55	4e-88
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	469	769	1717	17.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13775.1	314	405	629	4.76	92	33	1e-07
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1642	Augustus	mRNA	95682	104320	.	-	.	ID=Dca13775.1;Parent=Dca13775
scaffold1642	Augustus	exon	95682	96739	.	-	.	ID=Dca13775.1.exon1;Parent=Dca13775.1
scaffold1642	Augustus	exon	101899	102199	.	-	.	ID=Dca13775.1.exon2;Parent=Dca13775.1
scaffold1642	Augustus	exon	102697	102780	.	-	.	ID=Dca13775.1.exon3;Parent=Dca13775.1
scaffold1642	Augus-PASA	exon	102883	103002	.	-	.	ID=Dca13775.1.exon4;Parent=Dca13775.1
scaffold1642	Augus-PASA	exon	103467	103631	.	-	.	ID=Dca13775.1.exon5;Parent=Dca13775.1
scaffold1642	Augustus	exon	103780	103903	.	-	.	ID=Dca13775.1.exon6;Parent=Dca13775.1
scaffold1642	Augustus	exon	104283	104320	.	-	.	ID=Dca13775.1.exon7;Parent=Dca13775.1