Dca13887.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1649)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13887.1 |
1 |
239 |
273 |
57.14 |
239 |
66 |
3e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
886 |
896 |
26.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13887.1 |
27 |
240 |
273 |
29.67 |
214 |
38 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1387 |
1401 |
15.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1649 |
Augustus |
mRNA |
60069 |
65028 |
. |
- |
. |
ID=Dca13887.1;Parent=Dca13887 |
| scaffold1649 |
Augustus |
exon |
60069 |
60173 |
. |
- |
. |
ID=Dca13887.1.exon1;Parent=Dca13887.1 |
| scaffold1649 |
Augustus |
exon |
64312 |
65028 |
. |
- |
. |
ID=Dca13887.1.exon2;Parent=Dca13887.1 |
