Carnation DB

Dca13903.1

Annotation

7-exons
f-1
sp|B9SKR7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1604350#GO:0005737;GO:0006914#0F1P1C
AT5G17290.1 | Symbols: ATG5, APG5, ATATG5 | autophagy protein Apg5 family | chr5:5687160-5689821 REVERSE LENGTH=337
Repeat List (scaffold165)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13903.1	1	326	342	53.5	326	56	9e-102
Target_name	Start	End	Length	Cov(%)
sp\|B9SKR7_RICCO	34	360	368	88.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13903.1	1	326	342	48.53	326	51	2e-92
Target_name	Start	End	Length	Cov(%)
AT5G17290.1	36	332	337	88.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold165	Augustus	mRNA	81069	83929	.	+	.	ID=Dca13903.1;Parent=Dca13903
scaffold165	Augustus	exon	81069	81193	.	+	.	ID=Dca13903.1.exon1;Parent=Dca13903.1
scaffold165	Augustus	exon	81897	81963	.	+	.	ID=Dca13903.1.exon2;Parent=Dca13903.1
scaffold165	Augustus	exon	82187	82276	.	+	.	ID=Dca13903.1.exon3;Parent=Dca13903.1
scaffold165	Augustus	exon	82437	82524	.	+	.	ID=Dca13903.1.exon4;Parent=Dca13903.1
scaffold165	Augustus	exon	82845	82979	.	+	.	ID=Dca13903.1.exon5;Parent=Dca13903.1
scaffold165	Augustus	exon	83094	83225	.	+	.	ID=Dca13903.1.exon6;Parent=Dca13903.1
scaffold165	Augustus	exon	83538	83929	.	+	.	ID=Dca13903.1.exon7;Parent=Dca13903.1