Carnation DB

Dca13923.1

Annotation

5-exons
f-1
sp|B9HTE6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821854#GO:0008270#1F0P0C
sp|B9RAN4_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1507440#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold1650)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13923.1	1	251	251	64.14	251	64	1e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9HTE6_POPTR	4	254	254	98.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13923.1	13	249	251	56.57	237	60	2e-80
Target_name	Start	End	Length	Cov(%)
AT1G13195.1	18	256	260	91.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1650	Augustus	mRNA	12119	16318	.	-	.	ID=Dca13923.1;Parent=Dca13923
scaffold1650	Augustus	exon	12119	12329	.	-	.	ID=Dca13923.1.exon1;Parent=Dca13923.1
scaffold1650	Augustus	exon	12410	12641	.	-	.	ID=Dca13923.1.exon2;Parent=Dca13923.1
scaffold1650	Augustus	exon	14291	14357	.	-	.	ID=Dca13923.1.exon3;Parent=Dca13923.1
scaffold1650	Augustus	exon	14442	14604	.	-	.	ID=Dca13923.1.exon4;Parent=Dca13923.1
scaffold1650	Augustus	exon	16236	16318	.	-	.	ID=Dca13923.1.exon5;Parent=Dca13923.1