Dca13929.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|Q53N03_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g14610#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold16503)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13929.1 |
1 |
378 |
427 |
44.49 |
378 |
50 |
1e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
970 |
1323 |
1553 |
22.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13929.1 |
171 |
349 |
427 |
17.09 |
179 |
40 |
1e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1076 |
1256 |
1539 |
11.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16503 |
Augustus |
mRNA |
1309 |
3931 |
. |
- |
. |
ID=Dca13929.1;Parent=Dca13929 |
| scaffold16503 |
Augustus |
exon |
1309 |
1569 |
. |
- |
. |
ID=Dca13929.1.exon1;Parent=Dca13929.1 |
| scaffold16503 |
Augustus |
exon |
1643 |
2059 |
. |
- |
. |
ID=Dca13929.1.exon2;Parent=Dca13929.1 |
| scaffold16503 |
Augustus |
exon |
2184 |
2433 |
. |
- |
. |
ID=Dca13929.1.exon3;Parent=Dca13929.1 |
| scaffold16503 |
Augustus |
exon |
3576 |
3931 |
. |
- |
. |
ID=Dca13929.1.exon4;Parent=Dca13929.1 |
