Dca13942.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold16512)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13942.1 |
1 |
205 |
211 |
58.76 |
205 |
50 |
2e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
893 |
896 |
27.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13942.1 |
5 |
190 |
211 |
32.22 |
186 |
30 |
2e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1161 |
1378 |
1401 |
15.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16512 |
Augustus |
mRNA |
2785 |
3548 |
. |
+ |
. |
ID=Dca13942.1;Parent=Dca13942 |
| scaffold16512 |
Augustus |
exon |
2785 |
3024 |
. |
+ |
. |
ID=Dca13942.1.exon1;Parent=Dca13942.1 |
| scaffold16512 |
Augustus |
exon |
3153 |
3548 |
. |
+ |
. |
ID=Dca13942.1.exon2;Parent=Dca13942.1 |
