Carnation DB

Dca13944.1

Annotation

22-exons
f-1
sp|B9RWZ4_RICCO#Cation-transporting atpase plant, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1707830#GO:0016021;GO:0005524;GO:0005388;GO:0005516;GO:0046872;GO:0006754#4F1P1C
Repeat List (scaffold16514)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13944.1	1	693	695	74.38	693	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RWZ4_RICCO	350	1069	1075	66.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13944.1	1	689	695	74.24	689	72	0
Target_name	Start	End	Length	Cov(%)
AT5G57110.1	350	1061	1074	66.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16514	Augustus	mRNA	7	8270	.	+	.	ID=Dca13944.1;Parent=Dca13944
scaffold16514	Augustus	exon	7	57	.	+	.	ID=Dca13944.1.exon1;Parent=Dca13944.1
scaffold16514	Augustus	exon	164	246	.	+	.	ID=Dca13944.1.exon2;Parent=Dca13944.1
scaffold16514	Augustus	exon	327	435	.	+	.	ID=Dca13944.1.exon3;Parent=Dca13944.1
scaffold16514	Augustus	exon	526	581	.	+	.	ID=Dca13944.1.exon4;Parent=Dca13944.1
scaffold16514	Augustus	exon	1875	1917	.	+	.	ID=Dca13944.1.exon5;Parent=Dca13944.1
scaffold16514	Augustus	exon	2274	2411	.	+	.	ID=Dca13944.1.exon6;Parent=Dca13944.1
scaffold16514	Augustus	exon	3350	3415	.	+	.	ID=Dca13944.1.exon7;Parent=Dca13944.1
scaffold16514	Augustus	exon	3498	3596	.	+	.	ID=Dca13944.1.exon8;Parent=Dca13944.1
scaffold16514	Augustus	exon	4083	4193	.	+	.	ID=Dca13944.1.exon9;Parent=Dca13944.1
scaffold16514	Augustus	exon	4392	4562	.	+	.	ID=Dca13944.1.exon10;Parent=Dca13944.1
scaffold16514	Augustus	exon	4721	4780	.	+	.	ID=Dca13944.1.exon11;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	5267	5431	.	+	.	ID=Dca13944.1.exon12;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	5585	5701	.	+	.	ID=Dca13944.1.exon13;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	5926	6024	.	+	.	ID=Dca13944.1.exon14;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	6213	6350	.	+	.	ID=Dca13944.1.exon15;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	6499	6599	.	+	.	ID=Dca13944.1.exon16;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	6941	6986	.	+	.	ID=Dca13944.1.exon17;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	7082	7216	.	+	.	ID=Dca13944.1.exon18;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	7376	7483	.	+	.	ID=Dca13944.1.exon19;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	7584	7675	.	+	.	ID=Dca13944.1.exon20;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	7960	8058	.	+	.	ID=Dca13944.1.exon21;Parent=Dca13944.1
scaffold16514	Augus-PASA	exon	8198	8270	.	+	.	ID=Dca13944.1.exon22;Parent=Dca13944.1