Carnation DB

Dca13984.1

Annotation

21-exons
f-1
sp|B9GVT2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_712319#GO:0006904#0F1P0C
AT1G12360.1 | Symbols: KEU | Sec1/munc18-like (SM) proteins superfamily | chr1:4201172-4206144 FORWARD LENGTH=666
Repeat List (scaffold1655)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13984.1	12	664	664	72.28	653	73	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GVT2_POPTR	11	666	666	98.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13984.1	13	664	664	69.87	652	71	0
Target_name	Start	End	Length	Cov(%)
AT1G12360.1	11	666	666	98.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1655	Augus-PASA	mRNA	47897	59605	.	-	.	ID=Dca13984.1;Parent=Dca13984
scaffold1655	Augus-PASA	exon	47897	47950	.	-	.	ID=Dca13984.1.exon1;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	48096	48185	.	-	.	ID=Dca13984.1.exon2;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	48321	48411	.	-	.	ID=Dca13984.1.exon3;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	48696	48892	.	-	.	ID=Dca13984.1.exon4;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	49541	49618	.	-	.	ID=Dca13984.1.exon5;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	49715	49825	.	-	.	ID=Dca13984.1.exon6;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	50170	50262	.	-	.	ID=Dca13984.1.exon7;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	50372	50497	.	-	.	ID=Dca13984.1.exon8;Parent=Dca13984.1
scaffold1655	Augus-PASA	exon	50955	51051	.	-	.	ID=Dca13984.1.exon9;Parent=Dca13984.1
scaffold1655	Augustus	exon	52022	52098	.	-	.	ID=Dca13984.1.exon10;Parent=Dca13984.1
scaffold1655	Augustus	exon	52182	52280	.	-	.	ID=Dca13984.1.exon11;Parent=Dca13984.1
scaffold1655	Augustus	exon	52385	52468	.	-	.	ID=Dca13984.1.exon12;Parent=Dca13984.1
scaffold1655	Augustus	exon	52554	52745	.	-	.	ID=Dca13984.1.exon13;Parent=Dca13984.1
scaffold1655	Augustus	exon	52822	52947	.	-	.	ID=Dca13984.1.exon14;Parent=Dca13984.1
scaffold1655	Augustus	exon	53183	53215	.	-	.	ID=Dca13984.1.exon15;Parent=Dca13984.1
scaffold1655	Augustus	exon	53308	53404	.	-	.	ID=Dca13984.1.exon16;Parent=Dca13984.1
scaffold1655	Augustus	exon	53511	53561	.	-	.	ID=Dca13984.1.exon17;Parent=Dca13984.1
scaffold1655	Augustus	exon	55472	55550	.	-	.	ID=Dca13984.1.exon18;Parent=Dca13984.1
scaffold1655	Augustus	exon	56636	56717	.	-	.	ID=Dca13984.1.exon19;Parent=Dca13984.1
scaffold1655	Augustus	exon	57356	57414	.	-	.	ID=Dca13984.1.exon20;Parent=Dca13984.1
scaffold1655	Augustus	exon	59527	59605	.	-	.	ID=Dca13984.1.exon21;Parent=Dca13984.1