Dca14002.1
Annotation
- 4-exons
- f-1
- sp|B9IC94_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_731013#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
- Os03t0783700-00 Similar to AP-1 complex subunit sigma-2.
- Repeat List (scaffold1656)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca14002.1 |
1 |
116 |
117 |
82.05 |
116 |
83 |
3e-55
|
Target_name |
Start |
End |
Length |
Cov(%) |
sp|B9IC94_POPTR |
2 |
117 |
161 |
72.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
Dca14002.1 |
1 |
113 |
117 |
81.19 |
113 |
85 |
2e-55
|
Target_name |
Start |
End |
Length |
Cov(%) |
Os03t0783700-00 |
2 |
114 |
162 |
69.75 |
Coding region
seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
scaffold1656 |
Augustus |
mRNA |
62314 |
62925 |
. |
+ |
. |
ID=Dca14002.1;Parent=Dca14002 |
scaffold1656 |
Augustus |
exon |
62314 |
62400 |
. |
+ |
. |
ID=Dca14002.1.exon1;Parent=Dca14002.1 |
scaffold1656 |
Augustus |
exon |
62480 |
62571 |
. |
+ |
. |
ID=Dca14002.1.exon2;Parent=Dca14002.1 |
scaffold1656 |
Augustus |
exon |
62658 |
62766 |
. |
+ |
. |
ID=Dca14002.1.exon3;Parent=Dca14002.1 |
scaffold1656 |
Augustus |
exon |
62860 |
62925 |
. |
+ |
. |
ID=Dca14002.1.exon4;Parent=Dca14002.1 |