Carnation DB

Dca14079.1

Annotation

8-exons
f-1
sp|D7KU71_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_475075#unknown#0F0P0C
Os04t0105700-01 Similar to B0616E02-H0507E05.5 protein.
Repeat List (scaffold166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14079.1	1	235	235	65.1	235	64	2e-83
Target_name	Start	End	Length	Cov(%)
sp\|D7KU71_ARALL	1	236	236	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14079.1	1	235	235	63.4	235	63	3e-84
Target_name	Start	End	Length	Cov(%)
AT1G62780.1	1	237	237	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold166	Augustus	mRNA	246407	248826	.	-	.	ID=Dca14079.1;Parent=Dca14079
scaffold166	Augustus	exon	246407	246469	.	-	.	ID=Dca14079.1.exon1;Parent=Dca14079.1
scaffold166	Augustus	exon	246613	246702	.	-	.	ID=Dca14079.1.exon2;Parent=Dca14079.1
scaffold166	Augustus	exon	246817	246902	.	-	.	ID=Dca14079.1.exon3;Parent=Dca14079.1
scaffold166	Augustus	exon	246992	247052	.	-	.	ID=Dca14079.1.exon4;Parent=Dca14079.1
scaffold166	Augustus	exon	247134	247206	.	-	.	ID=Dca14079.1.exon5;Parent=Dca14079.1
scaffold166	Augustus	exon	247411	247508	.	-	.	ID=Dca14079.1.exon6;Parent=Dca14079.1
scaffold166	Augustus	exon	248083	248232	.	-	.	ID=Dca14079.1.exon7;Parent=Dca14079.1
scaffold166	Augustus	exon	248740	248826	.	-	.	ID=Dca14079.1.exon8;Parent=Dca14079.1