Carnation DB

Dca14227.1

Annotation

8-exons
f-1
sp|D7UBZ2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0180g00270#GO:0009982;GO:0003723;GO:0001522#2F1P0C
sp|B9RY90_RICCO#Ribosomal pseudouridine synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0811340#GO:0003796;GO:0009982;GO:0003723;GO:0001522#3F1P0C
Repeat List (scaffold1670)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14227.1	1	324	345	60.86	324	64	2e-117
Target_name	Start	End	Length	Cov(%)
sp\|D7UBZ2_VITVI	150	476	476	68.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14227.1	1	324	345	55.36	324	58	6e-97
Target_name	Start	End	Length	Cov(%)
AT3G19440.1	144	469	477	68.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1670	Augustus	mRNA	4357	6843	.	-	.	ID=Dca14227.1;Parent=Dca14227
scaffold1670	Augustus	exon	4357	4770	.	-	.	ID=Dca14227.1.exon1;Parent=Dca14227.1
scaffold1670	Augustus	exon	5094	5140	.	-	.	ID=Dca14227.1.exon2;Parent=Dca14227.1
scaffold1670	Augustus	exon	5403	5508	.	-	.	ID=Dca14227.1.exon3;Parent=Dca14227.1
scaffold1670	Augustus	exon	5630	5734	.	-	.	ID=Dca14227.1.exon4;Parent=Dca14227.1
scaffold1670	Augustus	exon	5847	5960	.	-	.	ID=Dca14227.1.exon5;Parent=Dca14227.1
scaffold1670	Augustus	exon	6389	6469	.	-	.	ID=Dca14227.1.exon6;Parent=Dca14227.1
scaffold1670	Augustus	exon	6586	6633	.	-	.	ID=Dca14227.1.exon7;Parent=Dca14227.1
scaffold1670	Augustus	exon	6721	6843	.	-	.	ID=Dca14227.1.exon8;Parent=Dca14227.1