Carnation DB

Dca14251.1

Annotation

5-exons
f-1
sp|D7SXL8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0113g00560#unknown#0F0P0C
Os03t0168200-01 Similar to F16A14.21.
Repeat List (scaffold1671)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14251.1	1	275	275	64.36	275	62	3e-89
Target_name	Start	End	Length	Cov(%)
sp\|D7SXL8_VITVI	1	276	281	98.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14251.1	85	275	275	45.09	191	65	1e-68
Target_name	Start	End	Length	Cov(%)
Os03t0168200-01	80	265	266	69.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1671	Augus-PASA	mRNA	20149	22759	.	-	.	ID=Dca14251.1;Parent=Dca14251
scaffold1671	Augus-PASA	exon	20149	20271	.	-	.	ID=Dca14251.1.exon1;Parent=Dca14251.1
scaffold1671	Augus-PASA	exon	20348	20443	.	-	.	ID=Dca14251.1.exon2;Parent=Dca14251.1
scaffold1671	Augus-PASA	exon	20653	20788	.	-	.	ID=Dca14251.1.exon3;Parent=Dca14251.1
scaffold1671	Augus-PASA	exon	20893	20992	.	-	.	ID=Dca14251.1.exon4;Parent=Dca14251.1
scaffold1671	Augus-PASA	exon	22387	22759	.	-	.	ID=Dca14251.1.exon5;Parent=Dca14251.1