Dca14305.1
Annotation
- 3-exons
- f-2
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold16763)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14305.1 |
1 |
109 |
260 |
23.07 |
109 |
56 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1194 |
1302 |
1313 |
8.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14305.1 |
1 |
101 |
260 |
14.23 |
101 |
37 |
3e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1280 |
1378 |
1401 |
7.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16763 |
Augustus |
mRNA |
1662 |
4000 |
. |
- |
. |
ID=Dca14305.1;Parent=Dca14305 |
| scaffold16763 |
Augustus |
exon |
1662 |
1952 |
. |
- |
. |
ID=Dca14305.1.exon1;Parent=Dca14305.1 |
| scaffold16763 |
Augustus |
exon |
3008 |
3172 |
. |
- |
. |
ID=Dca14305.1.exon2;Parent=Dca14305.1 |
| scaffold16763 |
Augustus |
exon |
3673 |
4000 |
. |
- |
. |
ID=Dca14305.1.exon3;Parent=Dca14305.1 |
