Dca14327.1
Annotation
- 4-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1678)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14327.1 |
76 |
594 |
595 |
54.78 |
519 |
63 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
689 |
1185 |
1313 |
37.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14327.1 |
75 |
212 |
595 |
7.73 |
138 |
33 |
2e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
658 |
794 |
1428 |
9.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1678 |
Augustus |
mRNA |
74988 |
78392 |
. |
- |
. |
ID=Dca14327.1;Parent=Dca14327 |
| scaffold1678 |
Augustus |
exon |
74988 |
76374 |
. |
- |
. |
ID=Dca14327.1.exon1;Parent=Dca14327.1 |
| scaffold1678 |
Augustus |
exon |
76481 |
76655 |
. |
- |
. |
ID=Dca14327.1.exon2;Parent=Dca14327.1 |
| scaffold1678 |
Augustus |
exon |
77714 |
77765 |
. |
- |
. |
ID=Dca14327.1.exon3;Parent=Dca14327.1 |
| scaffold1678 |
Augustus |
exon |
78219 |
78392 |
. |
- |
. |
ID=Dca14327.1.exon4;Parent=Dca14327.1 |
