Dca14419.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1683)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14419.1 |
8 |
376 |
376 |
56.38 |
369 |
49 |
3e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
1029 |
1461 |
1501 |
28.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14419.1 |
209 |
373 |
376 |
20.74 |
165 |
42 |
8e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
8 |
195 |
230 |
81.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1683 |
Augustus |
mRNA |
60173 |
61509 |
. |
- |
. |
ID=Dca14419.1;Parent=Dca14419 |
| scaffold1683 |
Augustus |
exon |
60173 |
60561 |
. |
- |
. |
ID=Dca14419.1.exon1;Parent=Dca14419.1 |
| scaffold1683 |
Augustus |
exon |
60632 |
60940 |
. |
- |
. |
ID=Dca14419.1.exon2;Parent=Dca14419.1 |
| scaffold1683 |
Augustus |
exon |
61077 |
61509 |
. |
- |
. |
ID=Dca14419.1.exon3;Parent=Dca14419.1 |
