Dca14496.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQF8_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g15540#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold169)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14496.1 |
1 |
486 |
500 |
32.8 |
486 |
32 |
1e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQF8_ARATH |
476 |
993 |
1225 |
42.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14496.1 |
1 |
226 |
500 |
16.6 |
226 |
37 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
449 |
673 |
857 |
26.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold169 |
Augustus |
mRNA |
2931 |
4708 |
. |
+ |
. |
ID=Dca14496.1;Parent=Dca14496 |
| scaffold169 |
Augustus |
exon |
2931 |
3618 |
. |
+ |
. |
ID=Dca14496.1.exon1;Parent=Dca14496.1 |
| scaffold169 |
Augustus |
exon |
3894 |
4708 |
. |
+ |
. |
ID=Dca14496.1.exon2;Parent=Dca14496.1 |
