Dca14519.1
Annotation
- 4-exons
- f-1
- sp|F6HC92_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g01510#GO:0019867#0F0P1C
- AT5G05520.1 | Symbols: | Outer membrane OMP85 family protein | chr5:1632912-1635104 FORWARD LENGTH=524
- Repeat List (scaffold169)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14519.1 |
5 |
525 |
528 |
64.2 |
521 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HC92_VITVI |
3 |
532 |
534 |
99.25 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14519.1 |
13 |
526 |
528 |
55.87 |
514 |
58 |
1e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G05520.1 |
12 |
522 |
524 |
97.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold169 |
Augustus |
mRNA |
214230 |
222244 |
. |
+ |
. |
ID=Dca14519.1;Parent=Dca14519 |
| scaffold169 |
Augustus |
exon |
214230 |
214733 |
. |
+ |
. |
ID=Dca14519.1.exon1;Parent=Dca14519.1 |
| scaffold169 |
Augustus |
exon |
220045 |
220530 |
. |
+ |
. |
ID=Dca14519.1.exon2;Parent=Dca14519.1 |
| scaffold169 |
Augustus |
exon |
221465 |
221977 |
. |
+ |
. |
ID=Dca14519.1.exon3;Parent=Dca14519.1 |
| scaffold169 |
Augus-PASA |
exon |
222161 |
222244 |
. |
+ |
. |
ID=Dca14519.1.exon4;Parent=Dca14519.1 |
