Dca1454.1
Annotation
- 3-exons
- f-1
- sp|B9HVW4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_805703#unknown#0F0P0C
- AT3G54290.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:20104623-20105845 REVERSE LENGTH=350
- Repeat List (scaffold10428)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1454.1 |
6 |
141 |
147 |
55.78 |
136 |
61 |
2e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HVW4_POPTR |
174 |
309 |
309 |
44.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1454.1 |
4 |
136 |
147 |
47.61 |
133 |
53 |
2e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G54290.1 |
214 |
344 |
350 |
37.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10428 |
Augustus |
mRNA |
2694 |
3513 |
. |
+ |
. |
ID=Dca1454.1;Parent=Dca1454 |
| scaffold10428 |
Augustus |
exon |
2694 |
2864 |
. |
+ |
. |
ID=Dca1454.1.exon1;Parent=Dca1454.1 |
| scaffold10428 |
Augustus |
exon |
3141 |
3391 |
. |
+ |
. |
ID=Dca1454.1.exon2;Parent=Dca1454.1 |
| scaffold10428 |
Augustus |
exon |
3492 |
3513 |
. |
+ |
. |
ID=Dca1454.1.exon3;Parent=Dca1454.1 |
