Carnation DB

Dca14580.1

Annotation

5-exons
f-1
sp|B9HC95_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561506#GO:0000166;GO:0003723;GO:0003735;GO:0006412#3F1P0C
Os01t0348700-01 Similar to 60S ribosomal protein L23a (L25).
Repeat List (scaffold1695)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14580.1	47	191	191	67.01	145	89	6e-65
Target_name	Start	End	Length	Cov(%)
sp\|B9HC95_POPTR	12	155	155	92.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14580.1	38	191	191	68.06	154	84	2e-56
Target_name	Start	End	Length	Cov(%)
Os01t0348700-01	1	152	153	99.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1695	Augus-PASA	mRNA	24773	27524	.	-	.	ID=Dca14580.1;Parent=Dca14580
scaffold1695	Augus-PASA	exon	24773	24857	.	-	.	ID=Dca14580.1.exon1;Parent=Dca14580.1
scaffold1695	Augus-PASA	exon	25382	25742	.	-	.	ID=Dca14580.1.exon2;Parent=Dca14580.1
scaffold1695	Augus-PASA	exon	26525	26563	.	-	.	ID=Dca14580.1.exon3;Parent=Dca14580.1
scaffold1695	Augustus	exon	26660	26710	.	-	.	ID=Dca14580.1.exon4;Parent=Dca14580.1
scaffold1695	Augustus	exon	27485	27524	.	-	.	ID=Dca14580.1.exon5;Parent=Dca14580.1