Carnation DB

Dca14675.1

Annotation

7-exons
f-1
sp|B9HE16_POPTR#Amino acid permease#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819531#GO:0016021#0F0P1C
Repeat List (scaffold17)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14675.1	27	482	483	63.56	456	68	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HE16_POPTR	47	503	504	90.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14675.1	26	482	483	59.42	457	63	3e-174
Target_name	Start	End	Length	Cov(%)
Os06t0556000-01	32	486	488	93.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold17	Augus-PASA	mRNA	519081	521806	.	+	.	ID=Dca14675.1;Parent=Dca14675
scaffold17	Augus-PASA	exon	519081	519192	.	+	.	ID=Dca14675.1.exon1;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	519603	519836	.	+	.	ID=Dca14675.1.exon2;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	520351	520444	.	+	.	ID=Dca14675.1.exon3;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	520526	520743	.	+	.	ID=Dca14675.1.exon4;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	520837	520976	.	+	.	ID=Dca14675.1.exon5;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	521056	521283	.	+	.	ID=Dca14675.1.exon6;Parent=Dca14675.1
scaffold17	Augus-PASA	exon	521381	521806	.	+	.	ID=Dca14675.1.exon7;Parent=Dca14675.1