Carnation DB

Dca14691.1

Annotation

7-exons
f-1
sp|B9ILJ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_737569#GO:0008060;GO:0008270;GO:0032312#2F1P0C
AT4G13350.1 | Symbols: NIG | NSP (nuclear shuttle protein)-interacting GTPase | chr4:7770170-7773321 REVERSE LENGTH=602
Repeat List (scaffold170)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14691.1	1	433	456	56.14	433	56	2e-127
Target_name	Start	End	Length	Cov(%)
sp\|B9ILJ3_POPTR	1	451	649	69.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14691.1	1	391	456	43.2	391	50	9e-93
Target_name	Start	End	Length	Cov(%)
AT4G13350.1	1	368	602	61.12

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold170	Augustus	mRNA	75095	78491	.	+	.	ID=Dca14691.1;Parent=Dca14691
scaffold170	Augustus	exon	75095	75193	.	+	.	ID=Dca14691.1.exon1;Parent=Dca14691.1
scaffold170	Augus-PASA	exon	76419	76480	.	+	.	ID=Dca14691.1.exon2;Parent=Dca14691.1
scaffold170	Augus-PASA	exon	76618	76705	.	+	.	ID=Dca14691.1.exon3;Parent=Dca14691.1
scaffold170	Augus-PASA	exon	76796	76857	.	+	.	ID=Dca14691.1.exon4;Parent=Dca14691.1
scaffold170	Augus-PASA	exon	77163	77259	.	+	.	ID=Dca14691.1.exon5;Parent=Dca14691.1
scaffold170	Augustus	exon	77437	77877	.	+	.	ID=Dca14691.1.exon6;Parent=Dca14691.1
scaffold170	Augustus	exon	77970	78491	.	+	.	ID=Dca14691.1.exon7;Parent=Dca14691.1