Carnation DB

Dca14714.1

Annotation

7-exons
f-1
sp|B9RQK7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1493800#GO:0005089#1F0P0C
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide exchange factor 8 | chr3:8980695-8982793 REVERSE LENGTH=523
Repeat List (scaffold170)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14714.1	16	462	462	67.31	447	68	4e-173
Target_name	Start	End	Length	Cov(%)
sp\|B9RQK7_RICCO	102	554	554	81.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14714.1	9	462	462	61.68	454	61	1e-161
Target_name	Start	End	Length	Cov(%)
AT3G24620.1	75	523	523	85.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold170	Augustus	mRNA	290847	292961	.	+	.	ID=Dca14714.1;Parent=Dca14714
scaffold170	Augustus	exon	290847	290901	.	+	.	ID=Dca14714.1.exon1;Parent=Dca14714.1
scaffold170	Augustus	exon	291000	291116	.	+	.	ID=Dca14714.1.exon2;Parent=Dca14714.1
scaffold170	Augustus	exon	291375	291529	.	+	.	ID=Dca14714.1.exon3;Parent=Dca14714.1
scaffold170	Augustus	exon	291633	291707	.	+	.	ID=Dca14714.1.exon4;Parent=Dca14714.1
scaffold170	Augustus	exon	291803	292078	.	+	.	ID=Dca14714.1.exon5;Parent=Dca14714.1
scaffold170	Augustus	exon	292164	292484	.	+	.	ID=Dca14714.1.exon6;Parent=Dca14714.1
scaffold170	Augustus	exon	292572	292961	.	+	.	ID=Dca14714.1.exon7;Parent=Dca14714.1