Carnation DB

Dca14822.1

Annotation

28-exons
f-1
sp|B9HND7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_821354#GO:0030132;GO:0030130;GO:0005488;GO:0005198;GO:0006886;GO:0016192#2F2P2C
Repeat List (scaffold1708)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14822.1	1	1601	1653	88.38	1601	89	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HND7_POPTR	1	1646	1690	97.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14822.1	1	89	1653	4.35	89	81	4e-37
Target_name	Start	End	Length	Cov(%)
AT3G11130.1	1	89	1705	5.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1708	Augustus	mRNA	37028	48303	.	+	.	ID=Dca14822.1;Parent=Dca14822
scaffold1708	Augustus	exon	37028	37072	.	+	.	ID=Dca14822.1.exon1;Parent=Dca14822.1
scaffold1708	Augustus	exon	37684	37888	.	+	.	ID=Dca14822.1.exon2;Parent=Dca14822.1
scaffold1708	Augustus	exon	39024	39151	.	+	.	ID=Dca14822.1.exon3;Parent=Dca14822.1
scaffold1708	Augustus	exon	39821	39919	.	+	.	ID=Dca14822.1.exon4;Parent=Dca14822.1
scaffold1708	Augustus	exon	40012	40120	.	+	.	ID=Dca14822.1.exon5;Parent=Dca14822.1
scaffold1708	Augustus	exon	40326	40405	.	+	.	ID=Dca14822.1.exon6;Parent=Dca14822.1
scaffold1708	Augustus	exon	40520	40747	.	+	.	ID=Dca14822.1.exon7;Parent=Dca14822.1
scaffold1708	Augustus	exon	40836	40901	.	+	.	ID=Dca14822.1.exon8;Parent=Dca14822.1
scaffold1708	Augustus	exon	41091	41207	.	+	.	ID=Dca14822.1.exon9;Parent=Dca14822.1
scaffold1708	Augustus	exon	41346	41543	.	+	.	ID=Dca14822.1.exon10;Parent=Dca14822.1
scaffold1708	Augustus	exon	41650	41766	.	+	.	ID=Dca14822.1.exon11;Parent=Dca14822.1
scaffold1708	Augustus	exon	41913	41972	.	+	.	ID=Dca14822.1.exon12;Parent=Dca14822.1
scaffold1708	Augustus	exon	42091	42177	.	+	.	ID=Dca14822.1.exon13;Parent=Dca14822.1
scaffold1708	Augustus	exon	42299	42382	.	+	.	ID=Dca14822.1.exon14;Parent=Dca14822.1
scaffold1708	Augustus	exon	42468	42602	.	+	.	ID=Dca14822.1.exon15;Parent=Dca14822.1
scaffold1708	Augustus	exon	42696	42758	.	+	.	ID=Dca14822.1.exon16;Parent=Dca14822.1
scaffold1708	Augustus	exon	42848	42952	.	+	.	ID=Dca14822.1.exon17;Parent=Dca14822.1
scaffold1708	Augustus	exon	43150	43262	.	+	.	ID=Dca14822.1.exon18;Parent=Dca14822.1
scaffold1708	Augustus	exon	43345	43597	.	+	.	ID=Dca14822.1.exon19;Parent=Dca14822.1
scaffold1708	Augustus	exon	43706	43842	.	+	.	ID=Dca14822.1.exon20;Parent=Dca14822.1
scaffold1708	Augustus	exon	43925	44203	.	+	.	ID=Dca14822.1.exon21;Parent=Dca14822.1
scaffold1708	Augustus	exon	44288	45290	.	+	.	ID=Dca14822.1.exon22;Parent=Dca14822.1
scaffold1708	Augustus	exon	45843	46328	.	+	.	ID=Dca14822.1.exon23;Parent=Dca14822.1
scaffold1708	Augus-PASA	exon	46446	46616	.	+	.	ID=Dca14822.1.exon24;Parent=Dca14822.1
scaffold1708	Augus-PASA	exon	46703	46888	.	+	.	ID=Dca14822.1.exon25;Parent=Dca14822.1
scaffold1708	Augus-PASA	exon	47064	47186	.	+	.	ID=Dca14822.1.exon26;Parent=Dca14822.1
scaffold1708	Augus-PASA	exon	47390	47500	.	+	.	ID=Dca14822.1.exon27;Parent=Dca14822.1
scaffold1708	Augus-PASA	exon	48130	48303	.	+	.	ID=Dca14822.1.exon28;Parent=Dca14822.1