Carnation DB

Dca15000.1

Annotation

5-exons
f-1
sp|D7T9S4_VITVI#Peptidyl-prolyl cis-trans isomerase#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g00930#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold172)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15000.1	4	216	216	58.33	213	58	3e-61
Target_name	Start	End	Length	Cov(%)
sp\|D7T9S4_VITVI	1	216	216	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15000.1	20	216	216	52.31	197	58	1e-58
Target_name	Start	End	Length	Cov(%)
AT5G45680.1	22	208	208	89.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold172	Augus-PASA	mRNA	112223	113522	.	-	.	ID=Dca15000.1;Parent=Dca15000
scaffold172	Augus-PASA	exon	112223	112287	.	-	.	ID=Dca15000.1.exon1;Parent=Dca15000.1
scaffold172	Augus-PASA	exon	112397	112465	.	-	.	ID=Dca15000.1.exon2;Parent=Dca15000.1
scaffold172	Augus-PASA	exon	112566	112626	.	-	.	ID=Dca15000.1.exon3;Parent=Dca15000.1
scaffold172	Augus-PASA	exon	112965	113057	.	-	.	ID=Dca15000.1.exon4;Parent=Dca15000.1
scaffold172	Augus-PASA	exon	113160	113522	.	-	.	ID=Dca15000.1.exon5;Parent=Dca15000.1