Carnation DB

Dca15001.1

Annotation

6-exons
f-1
sp|D7TIU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04740#GO:0005525;GO:0015031;GO:0007264#1F2P0C
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, RABC2A | RAB GTPase homolog C2A | chr5:885741-887061 REVERSE LENGTH=210
Repeat List (scaffold172)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15001.1	23	221	221	74.66	199	83	2e-94
Target_name	Start	End	Length	Cov(%)
sp\|D7TIU1_VITVI	11	211	211	95.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15001.1	21	221	221	72.39	201	79	9e-95
Target_name	Start	End	Length	Cov(%)
AT5G03530.1	8	210	210	96.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold172	Augus-PASA	mRNA	114294	117834	.	-	.	ID=Dca15001.1;Parent=Dca15001
scaffold172	Augus-PASA	exon	114294	114398	.	-	.	ID=Dca15001.1.exon1;Parent=Dca15001.1
scaffold172	Augus-PASA	exon	114682	114810	.	-	.	ID=Dca15001.1.exon2;Parent=Dca15001.1
scaffold172	Augus-PASA	exon	115205	115326	.	-	.	ID=Dca15001.1.exon3;Parent=Dca15001.1
scaffold172	Augus-PASA	exon	115629	115694	.	-	.	ID=Dca15001.1.exon4;Parent=Dca15001.1
scaffold172	Augus-PASA	exon	115919	115987	.	-	.	ID=Dca15001.1.exon5;Parent=Dca15001.1
scaffold172	Augus-PASA	exon	117660	117834	.	-	.	ID=Dca15001.1.exon6;Parent=Dca15001.1