Carnation DB

Dca15017.1

Annotation

6-exons
f-1
sp|F6HMC0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0003g01720#GO:0009360;GO:0005524;GO:0003677;GO:0003887;GO:0017111;GO:0006260#4F1P1C
AT4G18820.1 | Symbols: | AAA-type ATPase family protein | chr4:10330371-10334090 FORWARD LENGTH=1097
Repeat List (scaffold172)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15017.1	1	606	606	67.65	606	64	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HMC0_VITVI	511	1142	1142	55.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15017.1	1	605	606	60.56	605	59	0
Target_name	Start	End	Length	Cov(%)
AT4G18820.1	532	1095	1097	51.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold172	Augustus	mRNA	281392	283952	.	+	.	ID=Dca15017.1;Parent=Dca15017
scaffold172	Augustus	exon	281392	281796	.	+	.	ID=Dca15017.1.exon1;Parent=Dca15017.1
scaffold172	Augustus	exon	281873	282092	.	+	.	ID=Dca15017.1.exon2;Parent=Dca15017.1
scaffold172	Augustus	exon	282202	282741	.	+	.	ID=Dca15017.1.exon3;Parent=Dca15017.1
scaffold172	Augus-PASA	exon	282837	283335	.	+	.	ID=Dca15017.1.exon4;Parent=Dca15017.1
scaffold172	Augus-PASA	exon	283603	283666	.	+	.	ID=Dca15017.1.exon5;Parent=Dca15017.1
scaffold172	Augus-PASA	exon	283860	283952	.	+	.	ID=Dca15017.1.exon6;Parent=Dca15017.1