Dca15023.1
Annotation
- 3-exons
- f-1
- sp|A3A4V2_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_05995#GO:0016021;GO:0005215#1F0P1C
- Os02t0232900-01 Similar to NOD26-like membrane integral protein ZmNIP1-1.
- Repeat List (scaffold172)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15023.1 |
38 |
181 |
189 |
58.2 |
144 |
57 |
4e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A3A4V2_ORYSJ |
41 |
235 |
243 |
80.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15023.1 |
44 |
181 |
189 |
32.27 |
138 |
45 |
2e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0232900-01 |
164 |
276 |
285 |
39.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold172 |
Augustus |
mRNA |
316275 |
320383 |
. |
- |
. |
ID=Dca15023.1;Parent=Dca15023 |
| scaffold172 |
Augustus |
exon |
316275 |
316497 |
. |
- |
. |
ID=Dca15023.1.exon1;Parent=Dca15023.1 |
| scaffold172 |
Augustus |
exon |
319557 |
319765 |
. |
- |
. |
ID=Dca15023.1.exon2;Parent=Dca15023.1 |
| scaffold172 |
Augustus |
exon |
320246 |
320383 |
. |
- |
. |
ID=Dca15023.1.exon3;Parent=Dca15023.1 |
