Carnation DB

Dca15197.1

Annotation

7-exons
f-1
sp|F6HHV8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0127g00400#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT1G10640.1 | Symbols: | Pectin lyase-like superfamily protein | chr1:3515478-3517807 REVERSE LENGTH=532
Repeat List (scaffold173)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15197.1	2	520	520	61.73	519	62	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HHV8_VITVI	40	518	518	92.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15197.1	91	520	520	55.19	430	67	4e-172
Target_name	Start	End	Length	Cov(%)
AT1G10640.1	115	532	532	78.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold173	Augustus	mRNA	180503	183257	.	-	.	ID=Dca15197.1;Parent=Dca15197
scaffold173	Augustus	exon	180503	180922	.	-	.	ID=Dca15197.1.exon1;Parent=Dca15197.1
scaffold173	Augustus	exon	181117	181307	.	-	.	ID=Dca15197.1.exon2;Parent=Dca15197.1
scaffold173	Augustus	exon	181655	181862	.	-	.	ID=Dca15197.1.exon3;Parent=Dca15197.1
scaffold173	Augustus	exon	181969	182016	.	-	.	ID=Dca15197.1.exon4;Parent=Dca15197.1
scaffold173	Augustus	exon	182100	182327	.	-	.	ID=Dca15197.1.exon5;Parent=Dca15197.1
scaffold173	Augustus	exon	182451	182582	.	-	.	ID=Dca15197.1.exon6;Parent=Dca15197.1
scaffold173	Augustus	exon	182922	183257	.	-	.	ID=Dca15197.1.exon7;Parent=Dca15197.1