Carnation DB

Dca15199.1

Annotation

8-exons
f-1
sp|B9HPX6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803974#GO:0003676;GO:0000166#2F0P0C
sp|B9SH88_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0527840#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold173)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15199.1	1	228	228	64.47	228	64	4e-82
Target_name	Start	End	Length	Cov(%)
sp\|B9HPX6_POPTR	2	234	234	99.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15199.1	1	228	228	60.08	228	55	3e-69
Target_name	Start	End	Length	Cov(%)
AT2G27790.1	1	240	240	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold173	Augustus	mRNA	199481	202219	.	-	.	ID=Dca15199.1;Parent=Dca15199
scaffold173	Augustus	exon	199481	199558	.	-	.	ID=Dca15199.1.exon1;Parent=Dca15199.1
scaffold173	Augustus	exon	199642	199704	.	-	.	ID=Dca15199.1.exon2;Parent=Dca15199.1
scaffold173	Augustus	exon	200200	200269	.	-	.	ID=Dca15199.1.exon3;Parent=Dca15199.1
scaffold173	Augustus	exon	200362	200470	.	-	.	ID=Dca15199.1.exon4;Parent=Dca15199.1
scaffold173	Augustus	exon	200550	200689	.	-	.	ID=Dca15199.1.exon5;Parent=Dca15199.1
scaffold173	Augustus	exon	200813	200893	.	-	.	ID=Dca15199.1.exon6;Parent=Dca15199.1
scaffold173	Augustus	exon	201952	202035	.	-	.	ID=Dca15199.1.exon7;Parent=Dca15199.1
scaffold173	Augustus	exon	202158	202219	.	-	.	ID=Dca15199.1.exon8;Parent=Dca15199.1