Dca15258.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold17334)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15258.1 |
26 |
209 |
440 |
13.4 |
184 |
33 |
5e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
23 |
206 |
896 |
20.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15258.1 |
216 |
425 |
440 |
17.5 |
210 |
37 |
6e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1178 |
1384 |
1401 |
14.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17334 |
Augustus |
mRNA |
2748 |
6339 |
. |
+ |
. |
ID=Dca15258.1;Parent=Dca15258 |
| scaffold17334 |
Augustus |
exon |
2748 |
3398 |
. |
+ |
. |
ID=Dca15258.1.exon1;Parent=Dca15258.1 |
| scaffold17334 |
Augustus |
exon |
5668 |
6339 |
. |
+ |
. |
ID=Dca15258.1.exon2;Parent=Dca15258.1 |
