Carnation DB

Dca15293.1

Annotation

6-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
Repeat List (scaffold1738)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15293.1	61	903	1720	24.36	843	50	0
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	11	789	1717	45.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15293.1	609	701	1720	2.03	93	38	8e-12
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1738	Augustus	mRNA	1982	11909	.	-	.	ID=Dca15293.1;Parent=Dca15293
scaffold1738	Augustus	exon	1982	2233	.	-	.	ID=Dca15293.1.exon1;Parent=Dca15293.1
scaffold1738	Augustus	exon	2642	2752	.	-	.	ID=Dca15293.1.exon2;Parent=Dca15293.1
scaffold1738	Augustus	exon	3029	3187	.	-	.	ID=Dca15293.1.exon3;Parent=Dca15293.1
scaffold1738	Augustus	exon	3280	5009	.	-	.	ID=Dca15293.1.exon4;Parent=Dca15293.1
scaffold1738	Augustus	exon	7158	7286	.	-	.	ID=Dca15293.1.exon5;Parent=Dca15293.1
scaffold1738	Augustus	exon	9128	11909	.	-	.	ID=Dca15293.1.exon6;Parent=Dca15293.1