Carnation DB

Dca15332.1

Annotation

7-exons
f-1
sp|D7TKY7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00510#GO:0003723#1F0P0C
AT2G38610.1 | Symbols: | RNA-binding KH domain-containing protein | chr2:16147552-16149638 REVERSE LENGTH=286
Repeat List (scaffold174)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15332.1	1	284	284	80.28	284	81	1e-132
Target_name	Start	End	Length	Cov(%)
sp\|D7TKY7_VITVI	1	281	281	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15332.1	1	283	284	76.4	283	76	4e-121
Target_name	Start	End	Length	Cov(%)
AT2G38610.1	1	285	286	99.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold174	Augus-PASA	mRNA	177820	182229	.	+	.	ID=Dca15332.1;Parent=Dca15332
scaffold174	Augus-PASA	exon	177820	177905	.	+	.	ID=Dca15332.1.exon1;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	178240	178328	.	+	.	ID=Dca15332.1.exon2;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	179429	179583	.	+	.	ID=Dca15332.1.exon3;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	180857	180973	.	+	.	ID=Dca15332.1.exon4;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	181113	181229	.	+	.	ID=Dca15332.1.exon5;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	181338	181481	.	+	.	ID=Dca15332.1.exon6;Parent=Dca15332.1
scaffold174	Augus-PASA	exon	182083	182229	.	+	.	ID=Dca15332.1.exon7;Parent=Dca15332.1